Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-6A0A075B603 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav6-6A0A075B603 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Gm44428-201ENSMUST00000204474 874 ntBASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6-6A0A075B603 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trav6-6A0A075B603 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-6A0A075B603 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-6A0A075B603 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6-6A0A075B603 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
Trav6-6A0A075B603 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6-6A0A075B603 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-6A0A075B603 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-6A0A075B603 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-6A0A075B603 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6-6A0A075B603 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav6-6A0A075B603 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-6A0A075B603 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-6A0A075B603 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-6A0A075B603 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-6A0A075B603 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav6-6A0A075B603 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-6A0A075B603 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-6A0A075B603 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-6A0A075B603 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-6A0A075B603 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-6A0A075B603 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms