Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gm1335-201ENSMUST00000121653 386 ntBASIC12.7□□□□□ -0.38
H2afb2S4R1M3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gm17150-201ENSMUST00000165577 381 ntBASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gm8602-201ENSMUST00000184045 607 ntBASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb2S4R1M3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm26035-201ENSMUST00000083065 308 ntBASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afb2S4R1M3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Gm16296-201ENSMUST00000159905 325 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Gm40466-201ENSMUST00000212174 422 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.68□□□□□ -0.38
H2afb2S4R1M3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms