Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scn8aQ9WTU3 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm25732-201ENSMUST00000175168 60 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Gm44262-201ENSMUST00000204969 372 ntBASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn8aQ9WTU3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gm29199-201ENSMUST00000187766 775 ntBASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn8aQ9WTU3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn8aQ9WTU3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms