Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim3Q9R1R2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm16177-201ENSMUST00000120728 718 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm27731-201ENSMUST00000185192 107 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm37497-201ENSMUST00000195830 798 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm43818-201ENSMUST00000200605 466 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim3Q9R1R2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.97□□□□□ -0.49
Trim3Q9R1R2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm16202-201ENSMUST00000117532 544 ntBASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm4271-201ENSMUST00000174444 973 ntBASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim3Q9R1R2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms