Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm5187-201ENSMUST00000117317 991 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm43630-201ENSMUST00000201550 776 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Gm10146-201ENSMUST00000072739 309 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AmfrQ9R049 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.21□□□□□ -0.13
AmfrQ9R049 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AmfrQ9R049 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.21□□□□□ -0.14
AmfrQ9R049 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
AmfrQ9R049 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
AmfrQ9R049 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.2□□□□□ -0.14
AmfrQ9R049 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gm12957-201ENSMUST00000117835 377 ntBASIC14.2□□□□□ -0.14
AmfrQ9R049 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.2□□□□□ -0.14
AmfrQ9R049 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AmfrQ9R049 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AmfrQ9R049 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms