Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm26399-201ENSMUST00000103937 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm12485-201ENSMUST00000119641 291 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Mir1895-201ENSMUST00000122615 79 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm25349-201ENSMUST00000177728 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm23616-201ENSMUST00000177797 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm25871-201ENSMUST00000177816 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm24752-201ENSMUST00000178240 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm24496-201ENSMUST00000178287 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm25649-201ENSMUST00000178476 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm25548-201ENSMUST00000178681 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm23147-201ENSMUST00000178841 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm26095-201ENSMUST00000179270 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm22171-201ENSMUST00000179283 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm23936-201ENSMUST00000179354 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm22619-201ENSMUST00000179516 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm25255-201ENSMUST00000179579 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm24755-201ENSMUST00000179691 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm26506-201ENSMUST00000179692 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm25086-201ENSMUST00000179931 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm23243-201ENSMUST00000180047 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm24659-201ENSMUST00000180212 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm24169-201ENSMUST00000180244 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm23689-201ENSMUST00000180354 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm27359-201ENSMUST00000184153 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm27785-201ENSMUST00000184268 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm27466-201ENSMUST00000184396 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm27703-201ENSMUST00000184836 110 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf4Q9QZS2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Gm11978-201ENSMUST00000122315 466 ntBASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Gm3436-201ENSMUST00000179930 840 ntBASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf4Q9QZS2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Rnf4Q9QZS2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms