Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm11793-201ENSMUST00000120433 981 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm42627-201ENSMUST00000197347 224 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm43822-201ENSMUST00000200285 476 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm9257-201ENSMUST00000221254 232 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rtp4Q9ER80 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Gm11591-201ENSMUST00000120063 702 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Gm18935-201ENSMUST00000212692 664 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rtp4Q9ER80 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Gm12363-201ENSMUST00000122250 668 ntBASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.91□□□□□ -0.5
Rtp4Q9ER80 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 178.5 ms