Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3a3Q9D554 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3a3Q9D554 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3a3Q9D554 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3a3Q9D554 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3a3Q9D554 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Gm44335-201ENSMUST00000196879 141 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Gm44297-201ENSMUST00000198304 141 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Gm44346-201ENSMUST00000198851 141 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3a3Q9D554 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Mir6990-201ENSMUST00000183724 91 ntBASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Gm27494-201ENSMUST00000184735 189 ntBASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sf3a3Q9D554 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sf3a3Q9D554 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms