Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm23935-201ENSMUST00000102303 57 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm24270-201ENSMUST00000102326 57 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm14719-201ENSMUST00000121891 340 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm24245-201ENSMUST00000157318 57 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm7730-201ENSMUST00000212486 454 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm19220-201ENSMUST00000222682 803 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssu72Q9CY97 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm6152-201ENSMUST00000151704 340 ntBASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm8099-201ENSMUST00000200510 742 ntBASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm18473-201ENSMUST00000220543 868 ntBASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssu72Q9CY97 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ssu72Q9CY97 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Ssu72Q9CY97 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Gm14704-201ENSMUST00000120300 874 ntBASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssu72Q9CY97 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms