Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm12291-201ENSMUST00000121627 311 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.2□□□□□ -0.46
Khdc3Q9CWU5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gm13813-201ENSMUST00000120998 787 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gm4271-201ENSMUST00000174444 973 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gm8602-201ENSMUST00000184045 607 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Khdc3Q9CWU5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms