Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim11Q99PQ2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Snord83b-201ENSMUST00000104546 94 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm27847-201ENSMUST00000183711 107 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm27375-201ENSMUST00000183799 107 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm27839-201ENSMUST00000184242 106 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm4768-201ENSMUST00000206199 686 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim11Q99PQ2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Gm19163-201ENSMUST00000223313 780 ntBASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim11Q99PQ2 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.46□□□□□ -0.1
Trim11Q99PQ2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim11Q99PQ2 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms