Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.67□□□□□ -0.38
Trim33Q99PP7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.67□□□□□ -0.38
Trim33Q99PP7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm5186-201ENSMUST00000218781 920 ntBASIC12.67□□□□□ -0.38
Trim33Q99PP7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.67□□□□□ -0.38
Trim33Q99PP7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.66□□□□□ -0.38
Trim33Q99PP7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Mir686-201ENSMUST00000102174 109 ntBASIC12.66□□□□□ -0.38
Trim33Q99PP7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.66□□□□□ -0.38
Trim33Q99PP7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.66□□□□□ -0.38
Trim33Q99PP7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.66□□□□□ -0.38
Trim33Q99PP7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim33Q99PP7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms