Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lysmd3Q99LE3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd3Q99LE3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.18□□□□□ -0.3
Lysmd3Q99LE3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms