Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm27627-201ENSMUST00000183644 150 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm9230-201ENSMUST00000188228 532 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 AU022133-201ENSMUST00000200601 873 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm44100-201ENSMUST00000204329 436 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcd2Q99JR8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 AY036118-201ENSMUST00000200021 923 ntBASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcd2Q99JR8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd2Q99JR8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms