Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.82□□□□□ -0.36
Cdk9Q99J95 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk9Q99J95 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.81□□□□□ -0.36
Cdk9Q99J95 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.81□□□□□ -0.36
Cdk9Q99J95 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.81□□□□□ -0.36
Cdk9Q99J95 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk9Q99J95 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.8□□□□□ -0.36
Cdk9Q99J95 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.8□□□□□ -0.36
Cdk9Q99J95 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.8□□□□□ -0.36
Cdk9Q99J95 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Syt7-204ENSMUST00000223586 1344 ntBASIC12.8□□□□□ -0.36
Cdk9Q99J95 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cdk9Q99J95 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdk9Q99J95 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms