Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Thumpd1Q99J36 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Gm14350-201ENSMUST00000116642 640 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Gm5687-201ENSMUST00000118252 640 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thumpd1Q99J36 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Gm44397-201ENSMUST00000195950 113 ntBASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Gm42599-201ENSMUST00000201308 469 ntBASIC11.31□□□□□ -0.6
Thumpd1Q99J36 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thumpd1Q99J36 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thumpd1Q99J36 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms