Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Gm25927-201ENSMUST00000175058 117 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Gm8099-201ENSMUST00000200510 742 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Snora73a-201ENSMUST00000082453 205 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Gm10478-201ENSMUST00000084451 396 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha3Q91Y16 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Mir1938-201ENSMUST00000158746 100 ntBASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdha3Q91Y16 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gm5187-201ENSMUST00000117317 991 ntBASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha3Q91Y16 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms