Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm6023-201ENSMUST00000118217 606 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm45925-201ENSMUST00000218882 744 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm13392-201ENSMUST00000117708 150 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm42627-201ENSMUST00000197347 224 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm44405-201ENSMUST00000198952 126 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm18054-201ENSMUST00000207539 555 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Gm10478-201ENSMUST00000084451 396 ntBASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha9Q91Y11 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Rmrp-201ENSMUST00000157463 271 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha9Q91Y11 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms