Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb1Q91Y08 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm12384-201ENSMUST00000119228 919 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm9630-201ENSMUST00000178304 885 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm6266-201ENSMUST00000203844 806 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb1Q91Y08 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm13492-201ENSMUST00000119772 665 ntBASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm14760-201ENSMUST00000121831 999 ntBASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms