Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb5Q91XZ5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Gm15703-201ENSMUST00000120250 880 ntBASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Gm22902-201ENSMUST00000158488 302 ntBASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Gm25732-201ENSMUST00000175168 60 ntBASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb5Q91XZ5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Gm23200-201ENSMUST00000104379 132 ntBASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Rmrp-201ENSMUST00000157463 271 ntBASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb5Q91XZ5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm9083-201ENSMUST00000120423 819 ntBASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm24749-201ENSMUST00000157838 343 ntBASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Gm7003-201ENSMUST00000195089 312 ntBASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb5Q91XZ5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms