Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm11978-201ENSMUST00000122315 466 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm16379-201ENSMUST00000161469 348 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm8762-201ENSMUST00000193486 339 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm4768-201ENSMUST00000206199 686 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Gm10478-201ENSMUST00000084451 396 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhga4Q91XY4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gm8062-201ENSMUST00000139696 444 ntBASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gm43630-201ENSMUST00000201550 776 ntBASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhga4Q91XY4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhga4Q91XY4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms