Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm12241-201ENSMUST00000118330 726 ntBASIC14.61□□□□□ -0.07
Ddx41Q91VN6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Gm6334-201ENSMUST00000207083 228 ntBASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Gm45865-201ENSMUST00000211815 945 ntBASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Cts7-204ENSMUST00000225321 1257 ntBASIC14.61□□□□□ -0.07
Ddx41Q91VN6 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ddx41Q91VN6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Gm6023-201ENSMUST00000118217 606 ntBASIC14.6□□□□□ -0.07
Ddx41Q91VN6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Gm24526-201ENSMUST00000082921 158 ntBASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ddx41Q91VN6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gm13297-201ENSMUST00000120205 934 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gm38341-201ENSMUST00000195357 515 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gm44364-201ENSMUST00000198368 141 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gm6458-201ENSMUST00000211573 635 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.59□□□□□ -0.07
Ddx41Q91VN6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ddx41Q91VN6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms