Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm14057-201ENSMUST00000120631 482 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm12403-201ENSMUST00000121384 959 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Mir7023-201ENSMUST00000185093 64 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm28760-201ENSMUST00000185995 736 ntBASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh18Q8VHR0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm11524-201ENSMUST00000119349 807 ntBASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm38144-201ENSMUST00000192790 465 ntBASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh18Q8VHR0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh18Q8VHR0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms