Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm27618-201ENSMUST00000183671 60 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm8502-201ENSMUST00000185708 901 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm21147-201ENSMUST00000186046 913 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm8510-201ENSMUST00000189202 895 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm2316-201ENSMUST00000190613 921 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpa1Q8VEE4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Mir6956-201ENSMUST00000183598 62 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm42660-201ENSMUST00000197733 947 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm43084-201ENSMUST00000200696 947 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Rpa1Q8VEE4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa1Q8VEE4 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm14767-201ENSMUST00000121559 586 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm27680-201ENSMUST00000184192 160 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm38294-201ENSMUST00000192831 381 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Gm43094-201ENSMUST00000196549 921 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa1Q8VEE4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms