Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpap2Q8VC34 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpap2Q8VC34 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Gm14760-201ENSMUST00000121831 999 ntBASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 AY702102-202ENSMUST00000194651 1173 ntBASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpap2Q8VC34 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Gm22018-201ENSMUST00000104357 131 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Mir7085-201ENSMUST00000184353 66 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Gm5904-201ENSMUST00000210286 865 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Gm19309-201ENSMUST00000218295 205 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Gm45930-201ENSMUST00000221330 292 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpap2Q8VC34 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Gm14127-201ENSMUST00000117906 678 ntBASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.91□□□□□ -0.18
Rpap2Q8VC34 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.91□□□□□ -0.18
Rpap2Q8VC34 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms