Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Gm23363-201ENSMUST00000175024 79 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.73□□□□□ -0.37
Vps39Q8R5L3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps39Q8R5L3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Gm8810-201ENSMUST00000172895 754 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Gm6244-201ENSMUST00000178732 841 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps39Q8R5L3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Gm11803-201ENSMUST00000119966 444 ntBASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Gm16479-201ENSMUST00000121706 932 ntBASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Gm9002-201ENSMUST00000178437 499 ntBASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Gm37497-201ENSMUST00000195830 798 ntBASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps39Q8R5L3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vps39Q8R5L3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms