Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm24255-201ENSMUST00000104481 128 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cdt1Q8R4E9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gm13786-201ENSMUST00000122371 333 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gm25668-201ENSMUST00000157700 129 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cdt1Q8R4E9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.33□□□□□ -0.43
Cdt1Q8R4E9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdt1Q8R4E9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdt1Q8R4E9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdt1Q8R4E9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdt1Q8R4E9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.33□□□□□ -0.44
Cdt1Q8R4E9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdt1Q8R4E9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms