Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Gm8602-201ENSMUST00000184045 607 ntBASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim29Q8R2Q0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim29Q8R2Q0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Gm43818-201ENSMUST00000200605 466 ntBASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim29Q8R2Q0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Gm10268-201ENSMUST00000085340 555 ntBASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim29Q8R2Q0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim29Q8R2Q0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms