Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Gm15703-201ENSMUST00000120250 880 ntBASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp7Q8R1T1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp7Q8R1T1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp7Q8R1T1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp7Q8R1T1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp7Q8R1T1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.21■□□□□ 0.18
Chmp7Q8R1T1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm14263-201ENSMUST00000117955 746 ntBASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm7003-201ENSMUST00000195089 312 ntBASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp7Q8R1T1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Gm11331-201ENSMUST00000119764 288 ntBASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp7Q8R1T1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms