Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Gm24526-201ENSMUST00000082921 158 ntBASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sf3a1Q8K4Z5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Gm45880-201ENSMUST00000213041 853 ntBASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Gm5781-201ENSMUST00000219792 443 ntBASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Gm10478-201ENSMUST00000084451 396 ntBASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sf3a1Q8K4Z5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm24548-201ENSMUST00000158650 108 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm27572-201ENSMUST00000183702 255 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sf3a1Q8K4Z5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sf3a1Q8K4Z5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms