Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm17794-201ENSMUST00000220252 955 ntBASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Gm5356-201ENSMUST00000093326 615 ntBASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc38Q8CDN8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Snord83b-201ENSMUST00000104546 94 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm13369-201ENSMUST00000119442 987 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm8652-201ENSMUST00000181363 964 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm27892-201ENSMUST00000185017 106 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm8099-201ENSMUST00000200510 742 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc38Q8CDN8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm11814-201ENSMUST00000119515 929 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm26035-201ENSMUST00000083065 308 ntBASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc38Q8CDN8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms