Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps53Q8CCB4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Gm11618-201ENSMUST00000117946 267 ntBASIC14.81□□□□□ -0.04
Vps53Q8CCB4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Gm37466-201ENSMUST00000195692 652 ntBASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Cts7-204ENSMUST00000225321 1257 ntBASIC14.81□□□□□ -0.04
Vps53Q8CCB4 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.81□□□□□ -0.04
Vps53Q8CCB4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps53Q8CCB4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Mir877-201ENSMUST00000104738 85 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm26083-201ENSMUST00000157904 193 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm16379-201ENSMUST00000161469 348 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm8762-201ENSMUST00000193486 339 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm45865-201ENSMUST00000211815 945 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm10146-201ENSMUST00000072739 309 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps53Q8CCB4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gm15808-201ENSMUST00000119046 604 ntBASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gm11978-201ENSMUST00000122315 466 ntBASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gm25261-201ENSMUST00000157416 134 ntBASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gm29396-201ENSMUST00000185659 716 ntBASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.79□□□□□ -0.04
Vps53Q8CCB4 Gm29199-201ENSMUST00000187766 775 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms