Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.38□□□□□ -0.27
Uba3Q8C878 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Uba3Q8C878 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Uba3Q8C878 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.38□□□□□ -0.27
Uba3Q8C878 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Uba3Q8C878 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Uba3Q8C878 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Uba3Q8C878 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.38□□□□□ -0.27
Uba3Q8C878 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.37□□□□□ -0.27
Uba3Q8C878 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Gm43133-201ENSMUST00000197472 463 ntBASIC13.37□□□□□ -0.27
Uba3Q8C878 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.37□□□□□ -0.27
Uba3Q8C878 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.37□□□□□ -0.27
Uba3Q8C878 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Gm24526-201ENSMUST00000082921 158 ntBASIC13.37□□□□□ -0.27
Uba3Q8C878 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Uba3Q8C878 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Uba3Q8C878 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.36□□□□□ -0.27
Uba3Q8C878 Gm43630-201ENSMUST00000201550 776 ntBASIC13.36□□□□□ -0.27
Uba3Q8C878 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Uba3Q8C878 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Uba3Q8C878 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Uba3Q8C878 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Uba3Q8C878 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 Daam2-202ENSMUST00000224595 1926 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm6023-201ENSMUST00000118217 606 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.35□□□□□ -0.27
Uba3Q8C878 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Uba3Q8C878 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm38158-201ENSMUST00000194617 339 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm42693-201ENSMUST00000196779 631 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm5904-201ENSMUST00000210286 865 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 Gm5781-201ENSMUST00000219792 443 ntBASIC13.35□□□□□ -0.27
Uba3Q8C878 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms