Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc60Q8C4J0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Gm11964-201ENSMUST00000120982 444 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Gm43118-201ENSMUST00000199149 775 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc60Q8C4J0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gm13316-201ENSMUST00000140537 691 ntBASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gm42693-201ENSMUST00000196779 631 ntBASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gm43630-201ENSMUST00000201550 776 ntBASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gm5904-201ENSMUST00000210286 865 ntBASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc60Q8C4J0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gm15703-201ENSMUST00000120250 880 ntBASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gm11793-201ENSMUST00000120433 981 ntBASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc60Q8C4J0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.16■□□□□ 0.18
Ccdc60Q8C4J0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms