Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rft1Q8C3B8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rft1Q8C3B8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Gm15371-201ENSMUST00000117057 784 ntBASIC11.37□□□□□ -0.59
Rft1Q8C3B8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Gm5186-201ENSMUST00000218781 920 ntBASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rft1Q8C3B8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Gm15806-201ENSMUST00000120696 955 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Gm15429-201ENSMUST00000151268 798 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Gm9002-201ENSMUST00000178437 499 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rft1Q8C3B8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rft1Q8C3B8 Gm13689-201ENSMUST00000119360 685 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms