Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf3Q8C120 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Gm43818-201ENSMUST00000200605 466 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Gm4768-201ENSMUST00000206199 686 ntBASIC13.22□□□□□ -0.29
Sh3rf3Q8C120 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms