Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm22323-201ENSMUST00000103832 109 ntBASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm24255-201ENSMUST00000104481 128 ntBASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm11531-201ENSMUST00000117614 555 ntBASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm2546-201ENSMUST00000182630 991 ntBASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm44364-201ENSMUST00000198368 141 ntBASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim47Q8C0E3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Gm14716-201ENSMUST00000120138 718 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Gm45925-201ENSMUST00000218882 744 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim47Q8C0E3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Gm37259-201ENSMUST00000193903 849 ntBASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim47Q8C0E3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms