Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ube3dQ8BX13 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm6447-201ENSMUST00000118905 835 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm1335-201ENSMUST00000121653 386 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm37497-201ENSMUST00000195830 798 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm42693-201ENSMUST00000196779 631 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm19931-201ENSMUST00000198920 368 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm6007-201ENSMUST00000208170 823 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ube3dQ8BX13 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube3dQ8BX13 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ube3dQ8BX13 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube3dQ8BX13 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube3dQ8BX13 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube3dQ8BX13 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube3dQ8BX13 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms