Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Nsd1-205ENSMUST00000224693 852 ntBASIC17.36■□□□□ 0.37
Usp40Q8BWR4 AC163667.3-201ENSMUST00000225774 222 ntBASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Gm18626-201ENSMUST00000221512 1409 ntBASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp40Q8BWR4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Gm17812-201ENSMUST00000204935 318 ntBASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC17.35■□□□□ 0.37
Usp40Q8BWR4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp40Q8BWR4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm27552-201ENSMUST00000183351 62 ntBASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm27844-201ENSMUST00000183613 62 ntBASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 CT025694.1-201ENSMUST00000226188 934 ntBASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm10371-202ENSMUST00000228010 1081 ntBASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp40Q8BWR4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Gm42840-201ENSMUST00000200303 2251 ntBASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp40Q8BWR4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Gm19994-201ENSMUST00000217086 586 ntBASIC17.33■□□□□ 0.36
Usp40Q8BWR4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC17.33■□□□□ 0.36
Usp40Q8BWR4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp40Q8BWR4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms