Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Gm13123-201ENSMUST00000122173 492 ntBASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cpsf4Q8BQZ5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm11618-201ENSMUST00000117946 267 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm4271-201ENSMUST00000174444 973 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm37497-201ENSMUST00000195830 798 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4Q8BQZ5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Gm23931-201ENSMUST00000103842 109 ntBASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Gm16202-201ENSMUST00000117532 544 ntBASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Gm8805-201ENSMUST00000117848 313 ntBASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Gm37922-201ENSMUST00000195596 455 ntBASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4Q8BQZ5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms