Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm4726-201ENSMUST00000135604 736 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm6019-201ENSMUST00000148369 736 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm8492-201ENSMUST00000182375 987 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm37458-201ENSMUST00000194055 410 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm17931-201ENSMUST00000208132 634 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 AC166344.1-201ENSMUST00000223745 674 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm43677-201ENSMUST00000198098 2378 ntBASIC17.71■□□□□ 0.43
Usp54Q8BL06 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.71■□□□□ 0.43
Usp54Q8BL06 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC17.71■□□□□ 0.42
Usp54Q8BL06 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp54Q8BL06 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 AC154671.1-201ENSMUST00000228617 1578 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Zkscan3-207ENSMUST00000223831 2101 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 n-R5s64-201ENSMUST00000102019 119 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm22711-201ENSMUST00000116890 133 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm12795-201ENSMUST00000117594 539 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm16071-201ENSMUST00000119589 793 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm17826-201ENSMUST00000189720 798 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm5852-201ENSMUST00000194119 1021 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Gm5542-201ENSMUST00000195485 1089 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 AC121960.1-201ENSMUST00000227982 564 ntBASIC17.7■□□□□ 0.42
Usp54Q8BL06 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp54Q8BL06 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Mir1956-201ENSMUST00000157748 65 ntBASIC17.69■□□□□ 0.42
Usp54Q8BL06 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Gm4310-201ENSMUST00000177847 889 ntBASIC17.69■□□□□ 0.42
Usp54Q8BL06 Gm5714-201ENSMUST00000197343 566 ntBASIC17.69■□□□□ 0.42
Usp54Q8BL06 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC17.69■□□□□ 0.42
Usp54Q8BL06 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms