Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.22□□□□□ -0.13
Trnp1Q80ZI1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm8199-201ENSMUST00000121323 823 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm22138-201ENSMUST00000158748 128 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm8343-201ENSMUST00000182705 994 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm28324-201ENSMUST00000187913 264 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm44958-201ENSMUST00000203734 736 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm17831-201ENSMUST00000205579 900 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trnp1Q80ZI1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trnp1Q80ZI1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm12857-201ENSMUST00000117678 592 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm9022-201ENSMUST00000182482 992 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm27530-201ENSMUST00000184096 98 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm4607-201ENSMUST00000206649 577 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm4157-201ENSMUST00000211647 679 ntBASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trnp1Q80ZI1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trnp1Q80ZI1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trnp1Q80ZI1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trnp1Q80ZI1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms