Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm7809-201ENSMUST00000153199 742 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm27023-201ENSMUST00000182372 285 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm38144-201ENSMUST00000192790 465 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Gm45219-201ENSMUST00000205602 465 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf38bQ80SY5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm13665-201ENSMUST00000120830 528 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm31256-201ENSMUST00000194705 506 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf38bQ80SY5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf38bQ80SY5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms