Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm28196-201ENSMUST00000187719 640 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm23270-201ENSMUST00000104055 131 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm2546-201ENSMUST00000182630 991 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm43138-201ENSMUST00000199123 708 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm44967-201ENSMUST00000207047 631 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.8□□□□□ -0.52
Pif1Q80SX8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pif1Q80SX8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm11531-201ENSMUST00000117614 555 ntBASIC11.79□□□□□ -0.52
Pif1Q80SX8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm24990-201ENSMUST00000157406 323 ntBASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm45186-201ENSMUST00000206874 478 ntBASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.79□□□□□ -0.52
Pif1Q80SX8 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Gm13097-201ENSMUST00000210722 397 ntBASIC11.79□□□□□ -0.52
Pif1Q80SX8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pif1Q80SX8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms