Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm18063-201ENSMUST00000208529 568 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm18052-201ENSMUST00000208750 559 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm25668-201ENSMUST00000157700 129 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm37259-201ENSMUST00000193903 849 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm6082-201ENSMUST00000215204 454 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh8Q7TSK3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Snord83b-201ENSMUST00000104546 94 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm17376-201ENSMUST00000166016 84 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm23363-201ENSMUST00000175024 79 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.54□□□□□ -0.4
Pcdh8Q7TSK3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms