Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Gm11524-201ENSMUST00000119349 807 ntBASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 AW822252-206ENSMUST00000208904 237 ntBASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Gm7775-201ENSMUST00000218871 853 ntBASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TwistnbQ78WZ7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TwistnbQ78WZ7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TwistnbQ78WZ7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms