Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm8451-201ENSMUST00000170338 447 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm21092-201ENSMUST00000178995 955 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm29410-201ENSMUST00000188383 694 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm5805-201ENSMUST00000072779 456 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm7536-201ENSMUST00000077389 444 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm5453-201ENSMUST00000080866 447 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm8737-201ENSMUST00000122208 642 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm29304-201ENSMUST00000186555 695 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm29223-201ENSMUST00000188867 695 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm37299-201ENSMUST00000193951 826 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Gm37921-201ENSMUST00000194333 695 ntBASIC10.73□□□□□ -0.69
Rif1Q6PR54 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rif1Q6PR54 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.72□□□□□ -0.69
Rif1Q6PR54 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Gm13171-201ENSMUST00000117233 391 ntBASIC10.72□□□□□ -0.69
Rif1Q6PR54 Gm11978-201ENSMUST00000122315 466 ntBASIC10.72□□□□□ -0.69
Rif1Q6PR54 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rif1Q6PR54 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.72□□□□□ -0.69
Rif1Q6PR54 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.72□□□□□ -0.69
Rif1Q6PR54 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.72□□□□□ -0.69
Rif1Q6PR54 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms