Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm12314-201ENSMUST00000118104 538 ntBASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm13045-201ENSMUST00000119019 712 ntBASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm8566-201ENSMUST00000120174 465 ntBASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Snrnp40Q6PE01 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Snrnp40Q6PE01 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Snrnp40Q6PE01 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.15□□□□□ -0.63
Snrnp40Q6PE01 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Snrnp40Q6PE01 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm12165-201ENSMUST00000117047 342 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm15515-201ENSMUST00000117827 822 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm5616-201ENSMUST00000165252 384 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm8741-201ENSMUST00000174736 384 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm44551-201ENSMUST00000208804 171 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gm5369-201ENSMUST00000217499 588 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Snrnp40Q6PE01 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms