Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcc2Q6PDG5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Gm17208-201ENSMUST00000168388 535 ntBASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Gm8099-201ENSMUST00000200510 742 ntBASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Gm19163-201ENSMUST00000223313 780 ntBASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcc2Q6PDG5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm12363-201ENSMUST00000122250 668 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm16296-201ENSMUST00000159905 325 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm25927-201ENSMUST00000175058 117 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm37008-201ENSMUST00000195712 319 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm42693-201ENSMUST00000196779 631 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm45880-201ENSMUST00000213041 853 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm26035-201ENSMUST00000083065 308 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcc2Q6PDG5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.8□□□□□ -0.04
Smarcc2Q6PDG5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms