Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm15703-201ENSMUST00000120250 880 ntBASIC11.71□□□□□ -0.53
AtmQ62388 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.71□□□□□ -0.53
AtmQ62388 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.71□□□□□ -0.53
AtmQ62388 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
AtmQ62388 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.71□□□□□ -0.53
AtmQ62388 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
AtmQ62388 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
AtmQ62388 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
AtmQ62388 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.71□□□□□ -0.54
AtmQ62388 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.71□□□□□ -0.54
AtmQ62388 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.71□□□□□ -0.54
AtmQ62388 Gm15352-201ENSMUST00000118696 270 ntBASIC11.71□□□□□ -0.54
AtmQ62388 Gm12164-201ENSMUST00000121695 551 ntBASIC11.71□□□□□ -0.54
AtmQ62388 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.71□□□□□ -0.54
AtmQ62388 Gm21092-201ENSMUST00000178995 955 ntBASIC11.71□□□□□ -0.54
AtmQ62388 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.71□□□□□ -0.54
AtmQ62388 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AtmQ62388 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.7□□□□□ -0.54
AtmQ62388 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Gm19931-201ENSMUST00000198920 368 ntBASIC11.7□□□□□ -0.54
AtmQ62388 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Gm4604-201ENSMUST00000025040 390 ntBASIC11.7□□□□□ -0.54
AtmQ62388 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
AtmQ62388 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Mir6941-201ENSMUST00000184711 59 ntBASIC11.7□□□□□ -0.54
AtmQ62388 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.7□□□□□ -0.54
AtmQ62388 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.7□□□□□ -0.54
AtmQ62388 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
AtmQ62388 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AtmQ62388 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AtmQ62388 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.69□□□□□ -0.54
AtmQ62388 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.69□□□□□ -0.54
AtmQ62388 Gm16305-201ENSMUST00000140747 556 ntBASIC11.69□□□□□ -0.54
AtmQ62388 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Gm17877-201ENSMUST00000192578 814 ntBASIC11.69□□□□□ -0.54
AtmQ62388 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.69□□□□□ -0.54
AtmQ62388 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.69□□□□□ -0.54
AtmQ62388 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.69□□□□□ -0.54
AtmQ62388 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.69□□□□□ -0.54
AtmQ62388 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.69□□□□□ -0.54
AtmQ62388 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.69□□□□□ -0.54
AtmQ62388 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.69□□□□□ -0.54
AtmQ62388 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.69□□□□□ -0.54
AtmQ62388 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
AtmQ62388 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
AtmQ62388 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
AtmQ62388 Gm24248-201ENSMUST00000157321 322 ntBASIC11.69□□□□□ -0.54
AtmQ62388 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms